成果展示

助力的研究成果
  1. Yuanying Peng,Honghai Yan,Laichun Guo,et al.Reference genome assemblies reveal the origin and evolution of allohexaploid oat.Nature Genetics,2022,54(8):1248-1258.
  2. Hengkuan Li,Long Jin,Yuhao Wang,Silu Hu,Keren Long & Mingzhou Li.Identification and analysis of circRNAs in the prefrontal cortices of wild boar and domestic pig.Animal Biotechnology,2022,1-12.
  3. Danyang Li, Houcheng Su, Kailin Jiang, et al.Fish Face Identification Based on Rotated Object Detection: Dataset and Exploration.Fishes,2022,7,219.
  4. Xingze Zheng, Feiyi Li, Bin Lin, et al.A Two-Stage Method to Detect the Sex Ratio of Hemp Ducks Based on Object Detection and Classification Networks.Animals,2022,12,1177.
  5. Jiao Li, Houcheng Su, Xingze Zheng, et al.Study of a QueryPNet Model for Accurate Detection and Segmentation of Goose Body Edge Contours.Animals, 2022,12,2653.
  6. Tang, C., Ma, J., Kong, F., et al.The Analysis of Transcriptomes and Microorganisms Reveals Differences between the Intestinal Segments of Guinea Pigs.Animals, 2022,12(21), 2925.
  7. Kailin Jiang,Tianyu Xie,Rui Yan,et al.An Attention Mechanism-Improved YOLOv7 Object Detection Algorithm for Hemp Duck Count Estimation.Agriculture,2022,12,1659.
  8. Long,K.,Su,D.,Li,X., et al.Identification of enhancers responsible for the coordinated expression of myosin heavy chain isoforms in skeletal muscle.BMC Genomics, 2022,23(1),519.
  9. Binhua Hu, Weilan Chen, Li Wan, et al.Short grain 5 controls grain length in rice by regulating cell expansion.Plant Science, 2022.323.111412.
  10. Long, K., Li, X., Su, D., et al.Exploring high-resolution chromatin interaction changes and functional enhancers of myogenic marker genes during myogenic differentiation.The Journal of Biological Chemistry,2022,298(8),102149.
  11. Weilan Chen,Xiaoling Hu,Li Hu,et al.Wide Grain 3, a GRAS Protein, Interacts with DLT to Regulate Grain Size and Brassinosteroid Signaling in Rice.Rice, 2022, 15:55.
  12. Tao Zhong,Yaxuan Wang,Xinlu Wang,et al.Diarrhea in suckling lambs is associated with changes in microbiota,immunological and biochemical parameters in an intensive production system.Frontiers in Microbiology,2022,10,20657.
  13. Kui,H., Ran,B., Yang,M. et al.Gene expression profiles of specific chicken skeletal muscles.Scientific Data,2022,9(1),552.
  14. Wang,X., Wu,J., Hu,S. et al.Transcriptome analysis revealed the roles of long non-coding RNA and mRNA in the bursa of Fabricius during pigeon(Columba livia) development.Frontiers in Immunology,2022,13,916086.
  15. Renqiang Yuan, Jiaman Zhang, Yujie Wang, …… Mingzhou Li,and Delin Mo.Reorganization of chromatin architecture during prenatal development of porcine skeletal muscle.DNA Research.2021, 0(0), 1–11.
  16. Minglei Zhi, Jinying Zhang,Qianzi Tang, Dawei Yu, Shuai Gao, Dengfeng Gao, …… Mingzhou Li and Jianyong Han.Generation and characterization of stable pig pregastrulation epiblast stem cell lines.cell research.2021,0:1-18.
  17. 周先坤,张进威,刘玲燕,肖苇航,李明洲,李学伟,马继登. 雄激素对肾脏功能影响的研究进展. 生命的化学,2021,41(4):712-723.
  18. 王邑尘,张进威,刘玲燕,肖苇航,李学伟,李明洲,马继登. 雄激素对肺发育的影响. 生命科学研究,2021,25(4):318-326.
  19. 陈玉慧,李学伟,马继登. 睾酮及其受体对心血管发育和功能的影响. 中国生物化学与分子生物学报,2021,37(11):1423-1431.
  20. Long Jin,Qianzi Tang ,Silu Hu,Zhongxu Chen,Xuming Zhou,Bo Zeng,Yuhao Wang......Xuewei Li & Mingzhou Li.A pig BodyMap transcriptome reveals diverse tissue physiologies and evolutionary dynamics of transcription.Nature Communications.2021,12,3715.
  21. Xun Wang, Peiqi Yan, Siyuan Feng, Yi Luo, Jiyuan Liang, Ling Zhao, Haifeng Liu, Qianzi Tang, Keren Long, Long Jin, Jideng Ma, Anan Jiang, Surong Shuai and Mingzhou Li.Identification and expression pattern analysis of miRNAs in pectoral muscle during pigeon (Columba livia) development.PeerJ.2021,9:e11438.
  22. 刘磊,王讯,罗毅,梁继元,颜培祺,李昕怡,刘薇,刘辰恺,李佳佳. 鸽小肠上皮细胞的分离培养与鉴定. 浙江农业学报,2021,33(2):239-247.
  23. Jing Li, Yu Lin, Qianzi Tang, Mingzhou Li.Understanding three-dimensional chromatin organization in diploid genomes.Computational and Structural Biotechnology Journal.2021,19:3589-3598.
  24. J. Zhang, K. Long, J. Wang, J. Zhang, L. Jin, Q. Tang, X. Li, J. Ma, M. Li and A. Jiang.Yak miR-2285o-3p attenuates hypoxia-induced apoptosis by targeting caspase-3.animal genetics.doi: 10.1111/age.13153.
  25. Rui Wang and Qianzi Tang.Current Advances on the Important Roles of Enhancer RNAs in Molecular Pathways of Cancer.international journal of molecular sciences.2021,22(11),5640.
  26. Xingxing Zhu, Haoyu Zhang and Qianzi Tang.pyRSD-CoEv:A PYTHON package for selective sweep detection and co-evolutionary gene cluster identification.animal genetics.2021.11.2 https://doi.org/10.1111/age.13151.
  27. WANG Kai, WU Ping-xian, WANG Shu-jie, JI Xiang, CHEN Dong, JIANG An-an, XIAO Wei-hang, JIANG Yan-zhi, ZHU Li, ZENG Yang-shuang, XU Xu, QIU Xiao-tian, LI Ming-zhou, LI Xue-wei, TANG Guo-qing.Epigenome-wide DNA methylation analysis reveals differentially methylation patterns in skeletal muscle between Chinese Chenghua and Qingyu pigs.Journal of Integrative Agriculture.2021,online.
  28. WANG Kai, WU Ping-xian, WANG Shu-jie, JI Xiang, CHEN Dong, JIANG An-an, XIAO Wei-hang, GU Yi-ren, JIANG Yan-zhi, ZENG Yang-shuang, XU Xu, LI Xue-wei, TANG Guo-qing.Genome-wide DNA methylation analysis in Chinese Chenghua and Yorkshire pigs.BMC Genomic Data.2021,22,1,21.
  29. Peng Ma, Xiao Zhang, Bowen Luo, Zhen Chen, Xuan He, Haiying Zhang, Binyang Li, Dan Liu, Ling Wu, Shiqiang Gao, Duojiang Gao, Suzhi Zhang, Shibin Gao*.Transcriptomic and genome-wide association study reveal long noncoding RNAs responding to nitrogen deficiency in maize.BMC Plant Biology.2021,21(1): 1-19.
  30. Xiao Zhang, Zhiyong Ren, Bowen Luo, Haixu Zhong, Peng Ma, Hongkai Zhang, Hongmei Hu, Yikai Wang, Haiying Zhang, Dan Liu, Ling Wu, Zhi Nie, Yonghui Zhu, Wenzhu He, Suzhi Zhang, Shunzong Su, Yaou Shen, Shibin Gao*.Genetic architecture of maize yield traits dissected by QTL mapping and GWAS in maize.The Crop Journal.https://doi.org/10.1016/j.cj.2021.07.008.
  31. Qin, P., Lu, H., Du, H., Wang, H., Chen, W., Chen, Z., He, Q., Ou, S., Zhang, H., Li, X., et al. (2021).Pan-genome analysis of 33 genetically diverse rice accessions reveals hidden genomic variations.Cell.
  32. Yan Li, Guangliang Gao, Yu Lin.Pacific Biosciences assembly with Hi-C mapping generates an improved, chromosome-level goose genome.Gigascience 2020 Oct 24;9(10):giaa114. doi: 10.1093/gigascience/giaa114.
  33. Siyuan Feng, Jideng Ma, Keren Long.Comparative microRNA Transcriptomes in Domestic Goats Reveal Acclimatization to High Altitude.Front Genet 2020 Jul 31;11:809. doi: 10.3389/fgene.2020.00809. eCollection 2020.
  34. Jinwei Zhang, Jideng Ma, Xiankun Zhou.Comprehensive Analysis of mRNA and lncRNA Transcriptomes Reveals the Differentially Hypoxic Response of Preadipocytes During Adipogenesis.Front Genet2020 Aug 6;11:845. doi: 10.3389/fgene.2020.00845. eCollection 2020.
  35. Long Jin, Lirui Zhao, Silu Hu, Keren Long, Pengliang Liu, Rui Liu, Xuan Zhou, Yixin Wang, Zhiqing Huang, Xuxu Lin, Qianzi Tang and Mingzhou Li.Transcriptional Differences of Coding and Non-Coding Genes Related to the Absence of Melanocyte in Skins of Bama Pig.Genes,2020, 11, 47.
  36. Funong Luo, Keren Long, Xiaokai Li, Miaomiao Mai, Zhining Zhong, Side Li, Penghao Li, Shuling Zhou, Tinghuan Zhang, Xi Long, Long Jin & Mingzhou Li.Deficient of LRRC8A attenuates hypoxia-induced necrosis in 3T3-L1 cells.Bioscience, Biotechnology, and Biochemistry.2020, 84(6):1139-1145.
  37. Xiangjian Gou, Haoran Shi, Shifan Yu, Zhiqiang Wang, Caixia Li, Shihang Liu, Jian Ma, Guangdeng Chen, Tao Liu and Yaxi Liu.SSRMMD: A Rapid and Accurate Algorithm for Mining SSR Feature Loci and Candidate Polymorphic SSRs Based on Assembled Sequences.Frontiers in Genetics.2020
  38. Siyuan Xu, Wenliang Su, Dan Yang, Zhiyong Li.A Application of adaptive generalized S transform in formation Q value extraction.2020 International Conference on Computer Vision, Image and Deep Learning.2020: 689-693
  39. Zhiyong Li, Yunzhong Luo, Yaojun Wang.Seismic facies pattern recognition based on 3D Gabor transform and two-step clustering analysis.2020 International Conference on Computer Vision, Image and Deep Learning,2020: 201-205.
  40. Liangben Cao,Xixin Zhang,Jingyu Pu,Siyuan Xu,Xinlin Cai,Zhiyong Li.The field wheat count based on the EfficientDet algorithm.2020 International Conference on Smart System,Mechatronics and Information Engineering(SSMIE).2020
  41. 《慧眼识麦》,学生作品2020年(第13届)计算机设计大赛二等奖
  42. 罗扶农 何梦楠 唐茜子 李严 李明洲 金龙,哺乳动物染色质三维结构单元的特征及其相互关系.农业生物技术学报,2019,8: 1485-1497.
  43. Keren Long, Siyuan Feng, Jideng Ma, Jinwei Zhang, Long Jin, Qianzi tang, Xun Wang, Miaomiao Mai, Weihang Xiao, Lingyan Liu, Xuewei Li & Mingzhou Li.Small non-coding RNA transcriptome of four high-altitude vertebrates and their low-altitude relatives.Scientific Data.2019, 6:192.
  44. Jinwei Zhang, Wanling Qiu, Jideng Ma, Yujie Wang, Zihui Hu, Keren Long, Xun Wang, Long Jin, Qianzi Tang, Guoqing Tang, Li Zhu, Xuewei Li, Surong Shuai and Mingzhou Li.miR-27a-5p Attenuates Hypoxia-induced Rat Cardiomyocyte Injury by Inhibiting Atg7.International Journal of Molecular Sciences.2019, 20, 2418.
  45. Can Liu, Jideng Ma, Jinwei Zhang, Han Zhao, Yan Zhu, Jing Qi, Lingyan Liu, Li Zhu, Yanzhi Jiang, Guoqing Tang, Xuewei Li and Mingzhou Li.Testosterone Deficiency Caused by Castration Modulates Mitochondrial Biogenesis Through the AR/PGC1α/TFAM Pathway.Frontiers in Genetics.2019. 20: 372.
  46. Guosong Wang, Long Jin, Yan Li, Qianzi Tang, Silu Hu, Hengyong Xu, Clare A. Gill, Mingzhou Li and Jiwen Wang.Transcriptomic analysis between Normal and high-intake feeding geese provides insight into adipose deposition and susceptibility to fatty liver in migratory birds.BMC Genomics,2019, 20: 372.
  47. Bo Wen,Xuelu Feng,Qingqing Yang,Zhiyong Li.Seismic facies recognition based on prestack data using two-dimensional convolutional auto-encoder and cluster analysis[C].2019 IEEE 2nd International Conference on Information Communication and Signal Processing.IEEE,2019:430-434.
  48. Xuelu Feng,Bo Wen,Qingqing Yang,Zhiyong Li.Seismic facies recognition based on prestack data using two-dimensional Gabor transform and unsupervised clustering[C].2019 IEEE 2nd International Conference on Information Communication and Signal Processing.IEEE,2019:509-513.
  49. Yu Lin,Qianzi Tang,Yan Li,Mengnan He,Long Jin,Jideng Ma,Xun Wang,Keren Long,Zhiqing Huang,Xuewei Li,Yiren Gu and Mingzhou Li.Genomic analyses provide insights into breed-of-origin effects from purebreds on three-way crossbred pigs.Peer J,2019,7:e8009.
  50. 《一种无人小人的驱动》,学生申请实用新型专利1项




致谢模版

中文:本研究工作得到四川农业大学高性能计算平台支持
English:Supported by High-performance Computing Platform of Sichuan Agricultural University
欢迎大家将文章成果申报给我们,申报地址:文章成果列表
或邮件分享给我们(作者,题目,期刊名,年份,卷,期,页码等、pdf文档等,邮箱:hpc@sicau.edu.cn)